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A. Plasma Membrane Structure      
1. RBC Organization - How is the RBC membrane organized?  With answers and comments PDF    
2. General Organization - What are the general structural features of other plasma membranes? PDF    
3. Hydropathy Data - How are membrane protein structures inferred from hydropathy plots? PDF    
4. Assymetry Data - What do membrane labeling data say about membrane symmetry? PDF    
5. Gorter/Grendel Data - What do the Gorter and Grendel data indicate about membrane lipid organization? PDF    
6. Lipid Packing - What do quantitative packing data indicate about membrane lipid organization? PDF    
7. Cooling Tetrahymena - What is the effect of ambient cooling on the membrane lipid composition of a ciliate? PDF    
8. Integral Membrane Protein Mobility - Just how mobile are integral membrane proteins and phospholipid in the erythrocyte plasma membrane?  PDF  

8.a. Does a gold sphere attached to a single Band 3 IMP move in the plane of the membrane?

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8.b. Does Band 3 movement change over a longer period?

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8.c. Does removing the RBC cytoskeleton (spectrin) by enzymatic digestion affect Band 3 movement?

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8.d. Does moving a Band 3 IMP affect the organization of the underlying cytoskeleton (spectrin)?

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8.e.Does perturbing the cytoskeleton affect Band 3 behavior?

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8.f. Does manipulating a Band 3 IMP affect the behavior of a membrane phospholipid?

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9.How is the release of the egg's cortical granules regulated? PDF  
B. Plasma Membrane Function      
1. Nitella - How are solutes transported across the membrane of Nitella, a giant alga?  With answers and comments. PDF    
2. Duck RBC Osmosis - How do duck erythrocytes regain their normal volume following osmotic swelling? PDF    
3. RBC Ion Transport - What mechanisms might explain the apparently anomalous ion gradients across human, dog and cat erythrocyte membranes? PDF    
4. Ca 2+ Transport - How does the Ca 2+ pump work? PDF    
5. Alice's Giant Squid - What’s the basis for membrane resting potentials in organisms Through the Looking Glass? PDF    
6. Cl-/HCO3- Transport - What mechanism(s) is/are responsible for RBC chloride and bicarbonate transport? PDF    
7. RBC Spherocytosis - What’s the membrane basis for hereditary spherocytosis in humans? PDF    
C. Nuclear Function, Gene Replication, and Transcription      
1. Nucleoproteins - How are nucleoproteins transported into the nucleus? PDF  
D. Synthesis, Targeting, and Sorting      
1. Insect Hemoglobin - How is insect hemaglobin synthesized?  With answers and  comments PDF    
2. Membrane Proteins - How are membrane proteins synthesized, modified and targetted? PDF    
3. IMP - What do hydropathy data suggest about protein synthesis, modification and sorting? PDF  
4. Insulin - How is insulin likely synthesized?  With partial answers and comments PDF    

5.a. PM Turnover I - How is the plasma membrane replaced? – Abstracts of two experiments

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5.b.PM Turnover II - How is the plasma membrane replaced – data from three experiments?

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E. Cytoskeleton and Cell Motility      
1. Amoeboid Locomotion - How do amoebae move?  With answers and comments. PDF    
2. Kinesin - What’s the mechanism of kinesin’s movement along microtubules? PDF    
3. Isolated Flagella - What is the role of the central core in flagellar movement? PDF
4.a. Protein Movement - How do proteins move from the ER to the Golgi complex? PDF

4.b. The Temperature Shift Experiment

   

4.c. Nocodazole Pretreatment

 
5.a. Axon Movement - What is the mechanism responsible for rapid vesicular movement in axons?

5.b. Sense and Anti-Sense Axon Movement

 
F. Cell Signaling      
1. Alice's Giant Squid - How do Action Potentials work in organisms Through the Looking Glass? PDF    
2. Tetanus Toxin - How does tetanus toxin inhibit neurological signaling? PDF    
3. Lophotoxin - How do Gorgonian corals protect themselves from predation? PDF    
4. Venus Fly Trap - How does a Venus Fly Trap close so quickly? PDF    
5. Nitella - What’s the physiological and structural bases of  Nitella action potential? PDF    
6. K+ Channels - How do plant and animal K+ channels likely differ structurally, based on their different transport properties? PDF    
7. Mitogen - How do mitogens cause erroneous growth signals? PDF    
8. Na+/K+ Channels - How do Na+ and K+ channels compare, and why might K+ channels have evolved into a more varied family of proteins? PDF    
G. Bioenergetics      
1. Insect Flight Muscle - How might insect flight muscle mitochondria make more ATP than liver mitochondria? PDF    
2. Ca 2+ and Respiration - How does Ca2+ stimulate respiration in isolated mitochondria? PDF    

 

Preface | Introduction to Problem Solving | Problem Sets | Acknowledgments